Molecular Geometry
Limitations Of Rules And Exceptions
This simplified view of molecular geometry has limitations. Whenever there is more than one electron in an atom (i.e., all atoms heavier than hydrogen), the electron orbitals interact or hybridize. For example, the presence of a s orbital electron makes a p orbital electron somewhat s-like in shape (electron cloud density) and, in turn, presence of the p orbital electron makes an s orbital electron more p-like. Hybrid orbitals are named by combining the names of the participating orbitals. An s orbital and three p orbitals will hybridize to form an sp3 orbital that has the characteristics of both s and p orbitals.
The carbon atom at the center of a methane (CH4) molecule spreads out its four valence electrons into four sp3 orbitals pointed at the corners of a tetrahedron with bond angles of 109.5°.
In the case of ammonia, the five valence electrons surrounding nitrogen—two electrons occupying the outermost 2s orbital and three electrons in three 2p orbitals—hybridize to form four sp3 orbitals that, if equal, would separate themselves in three dimensional space by pointing at the corners of a tetrahedron. One of these orbitals, however, contains the lone electron pair, and the three remaining sp3 orbitals make additional space available by pointing at the corners of a pyramid with a triangular base.
See also Biochemistry; Biophysics; Chemical bond; Chemistry.
Resources
Books
Gillespie, R. J., and I. Hargittai. The VSEPR Model of Molecular Geometry. Boston: Allyn and Bacon, 1991.
Periodicals
Buntine, M. A., V. J. Hall, F. J. Kosovel, and E. R. T. Tiekink. "The Influence of Crystal Packing on Molecular Geometry: A Crystallographic and Theoretical Investigation of Selected Diorganotin Systems." Journal of Physical Chemistry 102, (1998): 2472–2482.
Other
"Molecular Geometry." September 1, 2000 [cited October 17, 2002]. <http://www.bcpl.net/~kdrews/molegeo/molegeo.html>.
K. Lee Lerner
Additional topics
Science EncyclopediaScience & Philosophy: Methane to Molecular clockMolecular Geometry - Predictable Rules, Vsepr Theory And Bond Angles, Bonds And Electron Pairs, Limitations Of Rules And Exceptions